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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800453.1_cds_XP_016469833.1_6186
CDS Infomation

[gene=LOC107792154] [db_xref=GeneID:107792154] [protein=putative polyketide hydroxylase] [frame=3] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016469833.1] [location=join(<725..1209,1339..1386,1595..1769,2885..2997,3109..3205,3279..3498,3731..3884,4113..4514)] [gbkey=CDS]
Sequence

TTTGATCGGATTGTGAGTCCTGTCTCTGTTGCACACTTCTCCCAGTACAAGCTCTCCAGG
TTACTGCTTAAGCACCTTGAGAAACTCGATTTCTGTACGATGAACTCTGAAAAGTGTGAG
CATGTCTCTATTGGTGAGAGGAAGATCTTTATGGGGCATGAGTGCATTGCAATCAATGAT
GCTGAGCATGGCGTCAGTGTAACAGCATCTTTCCTTACTGAAGGGAAGTATATTAAGAGA
GATATCCAGTGTCATTTCCTTGTTGGTACAGATGGTGCAGGAAGTACTGTCAGAAAGTCC
TTAGGAATTAACATGAGAGGTGAAAAGGACTTACAAAATCTTGTTAGTGTCCACTTCCAA
AGCCAAGAGTTAGGGAAGTATCTCATCAAAGAAAGACCCGGCATGCTGTTTTTCATCTTT
AATAAAGATGCTATTGGTGTTCTTGTTGCCCATGATCTCAAGCAAGGGGAATTTGTCCTG
CAGGTACCATTTTACCCACCTCAACAAAAGCTTGAGGACTTTAGTTGCGAGATGTGTAAG
AGATTGATCTTCAAATTGATCGGCCAAGAGCTTGCAGACGTCAATGTGATGGATATTAAG
CCTTGGGTGATGCATGCTGAAGTAGCTGAGAAGTTCCTGTCTCGTAACAACAGGATAATC
CTTGCTGGTGATGCTGCTCATCGATTTCCTCCTGCTGGTGGTTTTGGGATGAATACTGGT
ATTCAAGATGCTCAAAATCTTGCGTGGAAGTTAGCTTCTGTAATCAAGGGTATCTCACCA
ATATCAATTCTTACCTCGTATGAACTAGAACGTAGTCAGATAGCCCAATTTAATACAGCA
CTTAGCGTCCAAAACTTTAAGGCGGCAATGAGAGTTCCTGCTGCACTTGGTCTTGATCCA
ACAATAGCAAATGCAGTACATCGAGCTCTTAATAACACGGTTGGTTCTGTTCTGCCATCT
GGACTTCAAAGGACTATATTAGATGGAATATTCAGCATTGGTCGTGCACAACTCTCAGAT
TTTGTATTGAATGAAAATAATCCACTTGGATCTGCAAGGCTAGCCAAATTAAGACAGATA
TTTGAAGGAGGACAGAGCCTTCAGCTCCAGTTCCCTGCTGAGGATCTTGGTTTCAGTTAC
CAAAAAGGAGCATTGGTGTCTGAAGATTTTAGTGGGTTGAATGCGCATGAAGCACCTTCA
GGACGAAGAAGGGATTATATTCCTTGCTCGGAACCTGGATCAAGGCTCCCTCATATGAAT
CTTAAACTGCTTTCTAACCCGTCAAGTAAGGAAATATTCTCTACTCTGGACCTTGTATCT
GGAGATAAGGTTGAGTTTGTCCTTATAATAGCACCACTGGAGGAGTCCTACTATCTAGCT
CGAGCTGCTATAGAGGTGGCGAACAATTTTGAAGTGCCTTTAAAGGTTTGTGTAATATGG
CCAAAAGAAAGTATTAATGGAACCGGAAGAAGTGAGGCTGCGTTGACTCCCTCTAAATTT
TTTGAAGTTGTGGAAGTGAAGAGCTCATCAGATTCGCCATCCTGGTGGGACATCTGTCAG
ATGACGGACAGAGGAGCCATTTTAGTGAGACCTGATGAGCATATTGCTTGGCGTATAAAA
TCCAGAATTGCAGATCCTATCATGGAGATGGAAAAAGTTCTCCACATTGTTACAGGAGTT
GATTGCATTTGA

Peptide Sequence

PEP ID

XP_016469833.1
PEP Infomation

PREDICTED: putative polyketide hydroxylase [Nicotiana tabacum]
Sequence

MQPQDFDRIVSPVSVAHFSQYKLSRLLLKHLEKLDFCTMNSEKCEHVSIGERKIFMGHEC
IAINDAEHGVSVTASFLTEGKYIKRDIQCHFLVGTDGAGSTVRKSLGINMRGEKDLQNLV
SVHFQSQELGKYLIKERPGMLFFIFNKDAIGVLVAHDLKQGEFVLQVPFYPPQQKLEDFS
CEMCKRLIFKLIGQELADVNVMDIKPWVMHAEVAEKFLSRNNRIILAGDAAHRFPPAGGF
GMNTGIQDAQNLAWKLASVIKGISPISILTSYELERSQIAQFNTALSVQNFKAAMRVPAA
LGLDPTIANAVHRALNNTVGSVLPSGLQRTILDGIFSIGRAQLSDFVLNENNPLGSARLA
KLRQIFEGGQSLQLQFPAEDLGFSYQKGALVSEDFSGLNAHEAPSGRRRDYIPCSEPGSR
LPHMNLKLLSNPSSKEIFSTLDLVSGDKVEFVLIIAPLEESYYLARAAIEVANNFEVPLK
VCVIWPKESINGTGRSEAALTPSKFFEVVEVKSSSDSPSWWDICQMTDRGAILVRPDEHI
AWRIKSRIADPIMEMEKVLHIVTGVDCI

Transcript Sequence

Gene sequence data has not been registered.